AGENT SKILL

jupyter-notebook

Use when the user asks to create, scaffold, or edit Jupyter notebooks (`.ipynb`) for experiments, explorations, or tutorials; prefer the bundled templates and run the helper script `new_notebook.py` to generate a clean starting notebook.

License 许可
MIT
最近更新
2026-11-02
Stars
★ 0
Forks
0

01 前言 Front Matter

name
jupyter-notebook
description
Use when the user asks to create, scaffold, or edit Jupyter notebooks (`.ipynb`) for experiments, explorations, or tutorials; prefer the bundled templates and run the helper script `new_notebook.py` to generate a clean starting notebook.

03 SKILL.md 正文

Jupyter Notebook Skill

Create clean, reproducible Jupyter notebooks for two primary modes:

  • Experiments and exploratory analysis
  • Tutorials and teaching-oriented walkthroughs

Prefer the bundled templates and the helper script for consistent structure and fewer JSON mistakes.

When to use

  • Create a new .ipynb notebook from scratch.
  • Convert rough notes or scripts into a structured notebook.
  • Refactor an existing notebook to be more reproducible and skimmable.
  • Build experiments or tutorials that will be read or re-run by other people.

Decision tree

  • If the request is exploratory, analytical, or hypothesis-driven, choose experiment.
  • If the request is instructional, step-by-step, or audience-specific, choose tutorial.
  • If editing an existing notebook, treat it as a refactor: preserve intent and improve structure.

Skill path (set once)

export CODEX_HOME="${CODEX_HOME:-$HOME/.codex}"
export JUPYTER_NOTEBOOK_CLI="$CODEX_HOME/skills/jupyter-notebook/scripts/new_notebook.py"

User-scoped skills install under $CODEX_HOME/skills (default: ~/.codex/skills).

Workflow

  1. Lock the intent. Identify the notebook kind: experiment or tutorial. Capture the objective, audience, and what "done" looks like.

  2. Scaffold from the template. Use the helper script to avoid hand-authoring raw notebook JSON.

uv run --python 3.12 python "$JUPYTER_NOTEBOOK_CLI" \
  --kind experiment \
  --title "Compare prompt variants" \
  --out output/jupyter-notebook/compare-prompt-variants.ipynb

### Templates and helper script
### Temp and output conventions
### Dependencies (install only when needed)
### Environment
### Reference map

04 同仓库更多 Skills

Prekzursil
Prekzursil/agent-skills-toolchain

clarify-requirements

Resolve genuine pre-execution ambiguity by scanning repo context, generating 1-6 grounded options, and asking 1-3 focused questions via AskUserQuestion. NOT for mid-task use (injection risk); NOT when the goal is already unambiguous; use to disambiguate vague prompts before any file edits.

★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

openmm-md

Run FREE, open-source, Windows-native GPU molecular dynamics via the openmm-md MCP (OpenMM + CUDA on the local NVIDIA GPU). Use for protein / protein-ligand MD when you want a free stack or are on Windows without a Schrodinger license. Covers the full workflow (prepare, solvate, minimize, equilibrate, production, analyze, mmgbsa) AND an honest decision guide vs Schrodinger Desmond, including how to run Desmond legitimately on Linux or a cloud GPU with a real license. This is a deliberately LESSER free alternative and does NOT replace the schrodinger MCP tools. Do NOT use it to pick a free tool when a validated FEP+, WaterMap, IFD-MD, or Prime MM-GBSA result is actually required.

Skill与智能体开发
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

visual-review

Take screenshots of web pages and UI using Playwright for visual review and iteration

演示文稿测试与质量
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

status

Diagnostic status report — shows metaswarm installation state, project setup, and potential issues

★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

start

Use when starting work on any task, when the user mentions metaswarm, or when the user wants to begin tracked development work

Skill与智能体开发
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

setup

Interactive project setup — detects your project, configures metaswarm, writes project-local files

★ 0